Descrição
We provide occurrence data of black flies (Diptera: Simuliidae) from Indonesia, Malaysia, Thailand, and Vietnam with corresponding DNA derived data. The black flies were collected by Tropical Infectious Diseases Research and Education Centre (TIDREC), Universiti Malaya, Malaysia, except black flies from Thailand. DNA barcodes based on mitochondrial cytochrome c oxidase subunit I (COI) gene generated from the black fly samples are used to establish a database in GBIF. This project (BIFA6_017) is funded by the GBIF-BIFA program.
Registros de Dados
Os dados deste recurso de ocorrência foram publicados como um Darwin Core Archive (DwC-A), que é o formato padronizado para compartilhamento de dados de biodiversidade como um conjunto de uma ou mais tabelas de dados. A tabela de dados do núcleo contém 284 registros.
This IPT archives the data and thus serves as the data repository. The data and resource metadata are available for download in the downloads section. The versions table lists other versions of the resource that have been made publicly available and allows tracking changes made to the resource over time.
Versões
A tabela abaixo mostra apenas versões de recursos que são publicamente acessíveis.
Como citar
Pesquisadores deveriam citar esta obra da seguinte maneira:
Low V L, Ya'cob Z, Putt Q Y, Izwan-Anas N, Hew Y X (2023). Black Flies (Diptera: Simuliidae) of South East Asia. Version 1.10. Tropical Infectious Diseases Research and Education Centre (TIDREC), Universiti Malaya. Occurrence dataset. https://cloud.gbif.org/asia/resource?r=black_flies_of_indonesia_malaysia_and_vietnam&v=1.10
Direitos
Pesquisadores devem respeitar a seguinte declaração de direitos:
O editor e o detentor dos direitos deste trabalho é Tropical Infectious Diseases Research and Education Centre (TIDREC), Universiti Malaya. This work is licensed under a Creative Commons Attribution (CC-BY 4.0) License.
GBIF Registration
Este recurso foi registrado no GBIF e atribuído ao seguinte GBIF UUID: c80987f7-f87a-4ae3-a2cc-ccd59bc951e8. Tropical Infectious Diseases Research and Education Centre (TIDREC), Universiti Malaya publica este recurso, e está registrado no GBIF como um publicador de dados aprovado por Participant Node Managers Committee.
Palavras-chave
Occurrence; Simuliidae; Black Flies; Indonesia; Malaysia; Thailand; Vietnam; COI
Contatos
- Originador ●
- Ponto De Contato
- Principal Investigator
- Level 2, High Impact Research (HIR) Building, Universiti Malaya
- Ponto De Contato
- Co-Principal Investigator
- Level 2, High Impact Research (HIR) Building, Universiti Malaya
- Provedor Dos Metadados ●
- Originador ●
- Ponto De Contato
- Graduate Student
- Level 2, High Impact Research (HIR) Building, Universiti Malaya
- Provedor Dos Metadados ●
- Originador ●
- Ponto De Contato
- Graduate Student
- Level 2, High Impact Research (HIR) Building, Universiti Malaya
- Provedor Dos Metadados ●
- Originador ●
- Ponto De Contato
- Graduate Student
- Level 2, High Impact Research (HIR) Building, Universiti Malaya
- Ponto De Contato
- Co Principal Investigator
- Level 2, High Impact Research (HIR) Building, Universiti Malaya
Cobertura Geográfica
The black fly samples were collected from different localities in Indonesia, Malaysia, Thailand and Vietnam.
| Coordenadas delimitadoras | Sul Oeste [-10,401, 94,746], Norte Leste [23,08, 141,592] |
|---|
Cobertura Temporal
| Data Inicial / Data final | 2010-12-29 / 2021-06-01 |
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Dados Sobre o Projeto
This project will digitize black flies from Southeast Asia and seek to address taxonomic issues via DNA barcoding and metabarcoding approaches, providing a way forward for establishing a DNA barcode library for the family Simuliidae and long-term improvements and additions to black fly information in Southeast Asia.
| Título | DNA barcoding and taxonomic classification of black flies in Southeast Asia |
|---|---|
| Identificador | BIFA6_017 |
| Financiamento | Funded by Ministry of the Environment, Government of Japan; Co-funded by TIDREC, Universiti Malaya, Malaysia |
| Descrição da Área de Estudo | Black flies collected from the Oriental Region (particularly Southeast Asia) belong to the genus Simulium. |
O pessoal envolvido no projeto:
- Pesquisador Principal
- Pesquisador Principal
- Publicador
- Publicador
- Publicador
Métodos de Amostragem
Black fly samples collection was done at the accessible streams and rivers, whereby these are the breeding habitats for larvae and pupae of black flies. Pupae that attached on substrates such as leaves, stems, twigs, grasses and roots were collected using forceps. Then it will be kept alive individually in vials until adult emergence before being preserved in 80% ethanol for the identification process. The methods of collection and identification followed those of Takaoka (2003) and Adler et al. (2004).
| Área de Estudo | All black fly samples were collected from flowing streams. |
|---|
Descrição dos passos do método:
- The study procedures are as follows: sample collection, sample identification, sample DNA extraction, PCR.
Dados de Coleção
| Nome da Coleção | Institute of Biological Sciences (ISB), Faculty of Science, Universiti Malaya, Malaysia |
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| Nome da Coleção | Black Fly Gallery, TIDREC, Universiti Malaya, Malaysia |
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| Métodos de preservação do espécime | Álcool |
|---|
Metadados Adicionais
Black fly samples, except from Thailand, of this dataset are deposited in the laboratories of Institute of Biological Sciences and TIDREC, Universiti Malaya, Malaysia. Upon collection from study sites in Indonesia, Malaysia, and Vietnam, the black fly samples were indexed in the format of "Nation_Locality_Stream_# where collection occured_Vial_# where the sample from respective stream kept". For instance, the black fly sample from the first vial of stream 1, Lombok, Indonesia would be indexed as "IN_LB_S1V1". The black fly samples collected are individually preserved in 80% ETOH in a 2.0 mL tube and stored at -20 degree Celsius.
| Identificadores alternativos | c80987f7-f87a-4ae3-a2cc-ccd59bc951e8 |
|---|---|
| https://cloud.gbif.org/asia/resource?r=black_flies_of_indonesia_malaysia_and_vietnam |