Descrição
Registros de Dados
Os dados deste recurso de ocorrência foram publicados como um Darwin Core Archive (DwC-A), que é o formato padronizado para compartilhamento de dados de biodiversidade como um conjunto de uma ou mais tabelas de dados. A tabela de dados do núcleo contém 205 registros.
Também existem 1 tabelas de dados de extensão. Um registro de extensão fornece informações adicionais sobre um registro do núcleo. O número de registros em cada tabela de dados de extensão é ilustrado abaixo.
This IPT archives the data and thus serves as the data repository. The data and resource metadata are available for download in the downloads section. The versions table lists other versions of the resource that have been made publicly available and allows tracking changes made to the resource over time.
Versões
A tabela abaixo mostra apenas versões de recursos que são publicamente acessíveis.
Como citar
Pesquisadores deveriam citar esta obra da seguinte maneira:
Sanchez Gonzalez M, Companioni A, Gutierrez-Bugallo G, Camacho E, Serrano S, Rodriguez-Potrony H, Alfonso Y, Liberty B, Varens J, Martínez Y, Menendez Z (2025). Possible vectors associated to Oropouche virus transmission in Cuba, 2024. Version 1.5. Institute of Tropical Medicine Pedro Kourí. Occurrence dataset. https://cloud.gbif.org/lac/resource?r=ipk_orov&v=1.5
Direitos
Pesquisadores devem respeitar a seguinte declaração de direitos:
O editor e o detentor dos direitos deste trabalho é Institute of Tropical Medicine Pedro Kourí. To the extent possible under law, the publisher has waived all rights to these data and has dedicated them to the Public Domain (CC0 1.0). Users may copy, modify, distribute and use the work, including for commercial purposes, without restriction.
GBIF Registration
Este recurso foi registrado no GBIF e atribuído ao seguinte GBIF UUID: 70f36828-f03f-486a-bb62-b4be3cb59d06. Institute of Tropical Medicine Pedro Kourí publica este recurso, e está registrado no GBIF como um publicador de dados aprovado por Participant Node Managers Committee.
Palavras-chave
Sampling event; Aedes aegypti; Culex quinquefasciatus; Ceratopogonidae; Orthobunyavirus.
Contatos
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Cobertura Geográfica
Insect collection was conducted at 14 active OROV transmission areas across three Cuban provinces between May and October 2024: 1. Santiago de Cuba (Armando García, Distrito José Martí, Caney, 30 de Noviembre, 28 de Septiembre, Finlay, Distrito Josué País, Julian Grimau and Ernesto Che Guevara localities), 2. Cienfuegos ( III and VIII localities), and 3. Havana (Pulido Humaran, Grimau, and Puentes Grandes localities). Specimens were collected using adult traps (BG-Sentinel traps with BG-Lure cartridges and New Jersey light traps), which were deployed for 24 h starting at 8:00 a.m., and with insect aspirators (Prokopack) used once at each site, both outdoors and indoors, primarily in homes with confirmed or suspected OROV cases. Collection sites were categorized based on vegetation cover as follows: low (≤30%), moderate (30–70%), and high (≥70%) vegetation, following the criteria described by Vázquez et al. (2017).
| Coordenadas delimitadoras | Sul Oeste [20,013, -82,487], Norte Leste [23,104, -75,773] |
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Cobertura Taxonômica
The dataset comprises adult insect specimens collected during entomo-virological surveys in Cuba between May and October 2024, in the context of an Oropouche virus (Orthobunyavirus) outbreak. The taxonomic focus is on Diptera (true flies), including both mosquito species and biting midges potentially involved in virus transmission.
| Reino | Animalia |
|---|---|
| Filo | Arthropoda |
| Class | Insecta |
| Ordem | Diptera |
| Família | Culicidae, Ceratopogonidae |
Cobertura Temporal
| Data Inicial / Data final | 2024-05-23 / 2024-10-14 |
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Dados Sobre o Projeto
Nenhuma descrição disponível
| Título | Possible vectors associated to Oropouche virus transmission in Cuba, 2024 |
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| Descrição da Área de Estudo | Here, we present the results of the initial entomological investigations conducted in three Cuban provinces between May and October 2024. Insect collection was conducted at 14 active OROV transmission areas across three Cuban provinces between May and October 2024: 1. Santiago de Cuba (Armando García, Distrito José Martí, Caney, 30 de Noviembre, 28 de Septiembre, Finlay, Distrito Josué País, Julian Grimau and Ernesto Che Guevara localities), 2. Cienfuegos ( III and VIII localities), and 3. Havana (Pulido Humaran, Grimau, and Puentes Grandes localities). |
| Descrição do Design | Specimens were collected using adult traps (BG-Sentinel traps with BG-Lure cartridges and New Jersey light traps), which were deployed for 24 h starting at 8:00 a.m., and with insect aspirators (Prokopack) used once at each site, both outdoors and indoors, primarily in homes with confirmed or suspected OROV cases. Collection sites were categorized based on vegetation cover as follows: low (≤30%), moderate (30–70%), and high (≥70%) vegetation, following the criteria described by Vázquez et al. (2017). Collected specimens were stored at 4 °C during transportation and handling. Taxonomic identification was performed using established morphological keys (González, 2008) at the Entomology Reference Laboratory of the Pedro Kourí Institute of Tropical Medicine. Insects were sorted into pools of 5 to 25 individuals based on species, sex, collection date, and location. For female insects, only those that were visibly non-engorged were included in the pools. In addition, specimens that did not maintain the cold chain after collection were excluded from molecular analysis. Insect pools were homogenized in 500 µL of Dulbecco’s Modified Eagle Medium (DMEM) supplemented with 10% fetal bovine serum. After centrifugation at 13,000 ×g for 15 minutes at 4 °C, 140 µL of the supernatant was used for viral RNA extraction using the QIAamp Viral RNA Mini Kit (QIAGEN, Germany), following the manufacturer’s instructions. Detection of Oropouche virus (OROV) RNA targeted a fragment of the S gene using a one-step real-time reverse transcription PCR (RT-qPCR) protocol, as described by Naveca et al. (2017). The minimum infection rate (MIR) is an indicator of virus activity within a vector population (Chatterjee et al., 2021). MIR was calculated for each species using the following formula: MIR=(positive pools)/(total individual tested)*1000 |
O pessoal envolvido no projeto:
- Autor
Métodos de Amostragem
Adult insects were collected using a combination of trapping methods and manual aspiration in locations with active OROV circulation. Sampling aimed to cover sites in all three provinces and to document both the diversity and abundance of potential vector species.
| Área de Estudo | Entomo-virological surveys were conducted from May to October 2024 in areas of active Oropouche virus (OROV) transmission across three Cuban provinces. The study area included urban and peri-urban sites where confirmed human cases had been reported. Sampling focused on adult Diptera, particularly mosquito species and other potential vectors, to investigate their involvement in local OROV transmission. |
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Descrição dos passos do método:
- Identified areas of active OROV transmission within three Cuban provinces based on epidemiological data.
- Deployed traps and conducted manual aspiration to collect adult insects at selected sites.
- Sorted specimens to species or family level using morphological identification.
- Pooled specimens by species, location, and date of collection.
- Tested pools for OROV using real-time RT-PCR.
- Recorded taxonomic, spatial, and temporal data for each specimen or pool.
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Metadados Adicionais
| Introduction | |
|---|---|
| Getting Started | |
| Propósito | |
| Identificadores alternativos | 70f36828-f03f-486a-bb62-b4be3cb59d06 |
| https://cloud.gbif.org/lac/resource?r=ipk_orov |