Description
Enregistrements de données
Les données de cette ressource occurrence ont été publiées sous forme dune Archive Darwin Core (Darwin Core Archive ou DwC-A), le format standard pour partager des données de biodiversité en tant quensemble dun ou plusieurs tableurs de données. Le tableur de données du cœur de standard (core) contient 205 enregistrements.
1 tableurs de données dextension existent également. Un enregistrement dextension fournit des informations supplémentaires sur un enregistrement du cœur de standard (core). Le nombre denregistrements dans chaque tableur de données dextension est illustré ci-dessous.
Cet IPT archive les données et sert donc de dépôt de données. Les données et métadonnées de la ressource sont disponibles pour téléchargement dans la section téléchargements. Le tableau des versions liste les autres versions de chaque ressource rendues disponibles de façon publique et permet de tracer les modifications apportées à la ressource au fil du temps.
Versions
Le tableau ci-dessous naffiche que les versions publiées de la ressource accessibles publiquement.
Comment citer
Les chercheurs doivent citer cette ressource comme suit:
Sanchez Gonzalez M, Companioni A, Gutierrez-Bugallo G, Camacho E, Serrano S, Rodriguez-Potrony H, Alfonso Y, Liberty B, Varens J, Martínez Y, Menendez Z (2025). Possible vectors associated to Oropouche virus transmission in Cuba, 2024. Version 1.5. Institute of Tropical Medicine Pedro Kourí. Occurrence dataset. https://cloud.gbif.org/lac/resource?r=ipk_orov&v=1.5
Droits
Les chercheurs doivent respecter la déclaration de droits suivante:
L’éditeur et détenteur des droits de cette ressource est Institute of Tropical Medicine Pedro Kourí. En vertu de la loi, léditeur a abandonné ses droits par rapport à ces données et les a dédié au Domaine Public (CC0 1.0). Les utilisateurs peuvent copier, modifier, distribuer et utiliser ces travaux, incluant des utilisations commerciales, sans aucune restriction.
Enregistrement GBIF
Cette ressource a été enregistrée sur le portail GBIF, et possède lUUID GBIF suivante : 70f36828-f03f-486a-bb62-b4be3cb59d06. Institute of Tropical Medicine Pedro Kourí publie cette ressource, et est enregistré dans le GBIF comme éditeur de données avec lapprobation du Participant Node Managers Committee.
Mots-clé
Sampling event; Aedes aegypti; Culex quinquefasciatus; Ceratopogonidae; Orthobunyavirus.
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Couverture géographique
Insect collection was conducted at 14 active OROV transmission areas across three Cuban provinces between May and October 2024: 1. Santiago de Cuba (Armando García, Distrito José Martí, Caney, 30 de Noviembre, 28 de Septiembre, Finlay, Distrito Josué País, Julian Grimau and Ernesto Che Guevara localities), 2. Cienfuegos ( III and VIII localities), and 3. Havana (Pulido Humaran, Grimau, and Puentes Grandes localities). Specimens were collected using adult traps (BG-Sentinel traps with BG-Lure cartridges and New Jersey light traps), which were deployed for 24 h starting at 8:00 a.m., and with insect aspirators (Prokopack) used once at each site, both outdoors and indoors, primarily in homes with confirmed or suspected OROV cases. Collection sites were categorized based on vegetation cover as follows: low (≤30%), moderate (30–70%), and high (≥70%) vegetation, following the criteria described by Vázquez et al. (2017).
| Enveloppe géographique | Sud Ouest [20,013, -82,487], Nord Est [23,104, -75,773] |
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Couverture taxonomique
The dataset comprises adult insect specimens collected during entomo-virological surveys in Cuba between May and October 2024, in the context of an Oropouche virus (Orthobunyavirus) outbreak. The taxonomic focus is on Diptera (true flies), including both mosquito species and biting midges potentially involved in virus transmission.
| Kingdom | Animalia |
|---|---|
| Phylum | Arthropoda |
| Class | Insecta |
| Order | Diptera |
| Family | Culicidae, Ceratopogonidae |
Couverture temporelle
| Date de début / Date de fin | 2024-05-23 / 2024-10-14 |
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Données sur le projet
Pas de description disponible
| Titre | Possible vectors associated to Oropouche virus transmission in Cuba, 2024 |
|---|---|
| Description du domaine détude / de recherche | Here, we present the results of the initial entomological investigations conducted in three Cuban provinces between May and October 2024. Insect collection was conducted at 14 active OROV transmission areas across three Cuban provinces between May and October 2024: 1. Santiago de Cuba (Armando García, Distrito José Martí, Caney, 30 de Noviembre, 28 de Septiembre, Finlay, Distrito Josué País, Julian Grimau and Ernesto Che Guevara localities), 2. Cienfuegos ( III and VIII localities), and 3. Havana (Pulido Humaran, Grimau, and Puentes Grandes localities). |
| Description du design | Specimens were collected using adult traps (BG-Sentinel traps with BG-Lure cartridges and New Jersey light traps), which were deployed for 24 h starting at 8:00 a.m., and with insect aspirators (Prokopack) used once at each site, both outdoors and indoors, primarily in homes with confirmed or suspected OROV cases. Collection sites were categorized based on vegetation cover as follows: low (≤30%), moderate (30–70%), and high (≥70%) vegetation, following the criteria described by Vázquez et al. (2017). Collected specimens were stored at 4 °C during transportation and handling. Taxonomic identification was performed using established morphological keys (González, 2008) at the Entomology Reference Laboratory of the Pedro Kourí Institute of Tropical Medicine. Insects were sorted into pools of 5 to 25 individuals based on species, sex, collection date, and location. For female insects, only those that were visibly non-engorged were included in the pools. In addition, specimens that did not maintain the cold chain after collection were excluded from molecular analysis. Insect pools were homogenized in 500 µL of Dulbecco’s Modified Eagle Medium (DMEM) supplemented with 10% fetal bovine serum. After centrifugation at 13,000 ×g for 15 minutes at 4 °C, 140 µL of the supernatant was used for viral RNA extraction using the QIAamp Viral RNA Mini Kit (QIAGEN, Germany), following the manufacturer’s instructions. Detection of Oropouche virus (OROV) RNA targeted a fragment of the S gene using a one-step real-time reverse transcription PCR (RT-qPCR) protocol, as described by Naveca et al. (2017). The minimum infection rate (MIR) is an indicator of virus activity within a vector population (Chatterjee et al., 2021). MIR was calculated for each species using the following formula: MIR=(positive pools)/(total individual tested)*1000 |
Les personnes impliquées dans le projet:
- Auteur
Méthodes déchantillonnage
Adult insects were collected using a combination of trapping methods and manual aspiration in locations with active OROV circulation. Sampling aimed to cover sites in all three provinces and to document both the diversity and abundance of potential vector species.
| Etendue de létude | Entomo-virological surveys were conducted from May to October 2024 in areas of active Oropouche virus (OROV) transmission across three Cuban provinces. The study area included urban and peri-urban sites where confirmed human cases had been reported. Sampling focused on adult Diptera, particularly mosquito species and other potential vectors, to investigate their involvement in local OROV transmission. |
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Description des étapes de la méthode:
- Identified areas of active OROV transmission within three Cuban provinces based on epidemiological data.
- Deployed traps and conducted manual aspiration to collect adult insects at selected sites.
- Sorted specimens to species or family level using morphological identification.
- Pooled specimens by species, location, and date of collection.
- Tested pools for OROV using real-time RT-PCR.
- Recorded taxonomic, spatial, and temporal data for each specimen or pool.
Citations bibliographiques
- Romero-Alvarez, D. and L. E. Escobar (2018). "Oropouche fever, an emergent disease from the Americas." Microbes Infect 20(3): 135-146.
- Anderson, C. R., L. Spence, W. G. Downs and T. H. Aitken (1961). "Oropouche virus: a new human disease agent from Trinidad, West Indies." Am J Trop Med Hyg 10: 574-578.
- Benitez, A. J., M. Alvarez, L. Perez, R. Gravier, S. Serrano, D. M. Hernandez, M. M. Perez, G. Gutierrez-Bugallo, Y. Martinez, A. Companioni, C. Peña, J. R. de Armas, D. Couto, I. I. Betancourt, M. R. Sanchez, S. Resik, V. Kouri and M. G. Guzman (2024). "Oropouche Fever, Cuba, May 2024." Emerg Infect Dis 30(10): 2155-2159.
- Cardoso, B. F., O. P. Serra, L. B. Heinen, N. Zuchi, V. C. Souza, F. G. Naveca, M. A. Santos and R. D. Slhessarenko (2015). "Detection of Oropouche virus segment S in patients and inCulex quinquefasciatus in the state of Mato Grosso, Brazil." Mem Inst Oswaldo Cruz 110(6): 745-754.
- Chatterjee, S., C. M. Kim, N. R. Yun, D. M. Kim, H. J. Song and K. A. Chung (2021). "Molecular detection and identification of Culex flavivirus in mosquito species from Jeju, Republic of Korea." Virol J 18(1): 150.
- Costa C. F. et al., Evidence of vertical transmission of Zika virus in field-collected eggs of Aedes aegypti in the Brazilian Amazon. PLoS Negl Trop Dis 12, e0006594. (2018).
- da Silva Ferreira, R., L. C. de Toni Aquino da Cruz, V. J. de Souza, N. A. da Silva Neves, V. C. de Souza, L. C. F. Filho, P. da Silva Lemos, C. P. S. de Lima, F. G. Naveca, M. Atanaka, M. R. T. Nunes and R. D. Slhessarenko (2020). "Insect-specific viruses and arboviruses in adult male culicids from Midwestern Brazil." Infect Genet Evol 85: 104561.
- Day, J. F. (2001). "Predicting St. Louis encephalitis virus epidemics: lessons from recent, and not so recent, outbreaks." Annu Rev Entomol 46: 111-138.
- de Mendonça, S. F., L. V. R. Baldon, Y. M. H. Todjro, B. A. Marçal, M. E. C. Rodrigues, R. L. Moreira, E. C. Santos, M. N. Rocha, I. J. d. S. de Faria, B. D. M. Silva, T. N. Pereira, A. C. d. Freitas, M. M. Duarte, F. C. d. M. Iani, N. R. Guimarães, T. E. R. Adelino, M. Giovanetti, L. C. J. Alcantara, Á. G. A. Ferreira and L. A. Moreira (2025). "Oropouche orthobunyavirus in Urban Mosquitoes: Vector Competence, Coinfection, and Immune System Activation in Aedes aegypti." Viruses 17(4): 492.
- de Mendonça, S. F., M. N. Rocha, F. V. Ferreira, T. Leite, S. C. G. Amadou, P. H. F. Sucupira, J. T. Marques, A. G. A. Ferreira and L. A. Moreira (2021). "Evaluation of Aedes aegypti, Aedes albopictus, and Culex quinquefasciatus Mosquitoes Competence to Oropouche virus Infection." Viruses 13(5).
- Diallo, D. and M. Diallo (2017). "Why is Zika virus so rarely detected during outbreaks and how can detection be improved?" BMC Research Notes 10(1): 524.
- Feitoza, L. H. M., N. W. F. Gasparelo, A. C. A. Meireles, F. G. F. Rios, K. S. Teixeira, M. S. da Silva, M. A. Paz, T. P. Roca, H. M. Moreira, K. P. de França, D. S. V. Dall'Acqua, G. R. Julião and J. F. de Medeiros (2025). "Integrated surveillance for Oropouche Virus: Molecular evidence of potential urban vectors during an outbreak in the Brazilian Amazon." Acta Trop 261: 107487.
- Grunnill, M. and M. Boots (2016). "How Important is Vertical Transmission of Dengue Viruses by Mosquitoes (Diptera: Culicidae)?" J Med Entomol 53(1): 1-19.
- Gutiérrez-Bugallo, G., A. Boullis, Y. Martinez, L. Hery, M. Rodríguez, J. A. Bisset and A. Vega-Rúa (2020). "Vector competence of Aedes aegypti from Havana, Cuba, for dengue virus type 1, chikungunya, and Zika viruses." PLoS Negl Trop Dis 14(12): e0008941.
- Gutiérrez-Bugallo, G., R. Rodríguez-Roche, G. Díaz, M. Pérez, M. E. Mendizábal, I. Peraza, A. A. Vázquez, M. Alvarez, M. Rodríguez, J. A. Bisset and M. G. Guzmán (2018). "Spatio-temporal distribution of vertically transmitted dengue viruses by Aedes aegypti (Diptera: Culicidae) from Arroyo Naranjo, Havana, Cuba." Trop Med Int Health 23(12): 1342-1349.
- Hoch, A. L., F. d. P. Pinheiro, D. R. Roberts and M. d. L. C. Gomez (1987). "Laboratory transmission of Oropouche virus by Culex quinquefasciatus say." Bulletin of the Pan American Health Organization (PAHO);21(1),1987.
- McGregor, B. L., C. R. Connelly and J. L. Kenney (2021). "Infection, Dissemination, and Transmission Potential of North American Culex quinquefasciatus, Culex tarsalis, and Culicoides sonorensis for Oropouche Virus." Viruses 13(2).
- McGregor, B. L., P. T. Shults and E. G. McDermott (2022). "A Review of the Vector Status of North American Culicoides (Diptera: Ceratopogonidae) for Bluetongue Virus, Epizootic Hemorrhagic Disease Virus, and Other Arboviruses of Concern." Curr Trop Med Rep 9(4): 130-139.
- Miller, B. R., T. P. Monath, W. J. Tabachnick and V. I. Ezike (1989). "Epidemic yellow fever caused by an incompetent mosquito vector." Trop Med Parasitol 40(4): 396-399.
- Mohapatra, R. K., S. Mishra, P. Satapathy, V. Kandi and L. S. Tuglo (2024). "Surging Oropouche virus (OROV) cases in the Americas: A public health challenge." New Microbes New Infect 59: 101243.
- Naveca, F. G., V. A. D. Nascimento, V. C. Souza, B. T. D. Nunes, D. S. G. Rodrigues and P. Vasconcelos (2017). "Multiplexed reverse transcription real-time polymerase chain reaction for simultaneous detection of Mayaro, Oropouche, and Oropouche-like viruses." Mem Inst Oswaldo Cruz 112(7): 510-513.
- OPS/OMS (2024)a. Alerta epidemiológica Oropouche en la Región de las Américas, 2 de febrero del 2024. Organización Panamericana de la Salud / Organización Mundial de la Salud., OPS/OMS: 6.
- OPS/OMS (2024)b. Actualización Epidemiológica Oropouche en la Región de las Américas - 6 de septiembre del 2024. https://www.paho.org, OPS/OMS: 15.
- Payne, A. F., J. Stout, P. Dumoulin, T. Locksmith, L. A. Heberlein, M. Mitchell, A. Rodriguez-Hilario, A. P. Dupuis, 2nd and A. T. Ciota (2025). "Lack of Competence of US Mosquito Species for Circulating Oropouche Virus." Emerg Infect Dis 31(3): 619-621.
- Peraza Cuesta, I., M. Pérez Castillo, M. E. Mendizábal Alcalá, V. Valdés Miró, M. Leyva Silva and M. d. C. Marquetti Fernández (2015). "Riqueza y distribución de especies de culícidos en la provincia La Habana, Cuba." Revista Cubana de Medicina Tropical 67: 0-0.
- Pereira-Silva, J. W., C. M. Ríos-Velásquez, G. R. Lima, E. F. Marialva Dos Santos, H. C. M. Belchior, S. L. B. Luz, F. G. Naveca and F. A. C. Pessoa (2021). "Distribution and diversity of mosquitoes and Oropouche-like virus infection rates in an Amazonian rural settlement." PLoS One 16(2): e0246932.
- Pérez, Y. M., A. C. Ibáñez, Z. M. Díaz, E. C. Acosta, M. S. González, N. C. García, Q. del Rosario Casanova Drake and G. Gutierrez-Bugallo (2025). "First report of Culicoides paraensis (Goeldi, 1905) (Diptera: Ceratopogonidae) in Cuba: A new challenge for public health." Parasite Epidemiology and Control 29: e00423.
- Pinheiro, F. P., A. P. Travassos da Rosa, M. L. Gomes, J. W. LeDuc and A. L. Hoch (1982). "Transmission of Oropouche virus from man to hamster by the midge Culicoides paraensis." Science 215(4537): 1251-1253.
- Poongavanan, J., M. Dunaiski, G. D'or, M. U. G. Kraemer, M. Giovanetti, A. Lim, O. J. Brady, C. Baxter, V. Fonseca, L. Alcantara, T. de Oliveira and H. Tegally (2025). "Spatiotemporal disease suitability prediction for Oropouche virus and the role of vectors across the Americas." medRxiv.
- Riccò, M., S. Corrado, M. Bottazzoli, F. Marchesi, R. Gili, F. P. Bianchi, E. M. Frisicale, S. Guicciardi, D. Fiacchini, S. Tafuri, A. Cascio, P. G. Giuri and R. Siliquini (2024). "(Re-)Emergence of Oropouche Virus (OROV) Infections: Systematic Review and Meta-Analysis of Observational Studies." Viruses 16(9).
- Romero-Alvarez, D., L. E. Escobar, A. J. Auguste, S. Y. Del Valle and C. A. Manore (2023). "Transmission risk of Oropouche fever across the Americas." Infect Dis Poverty 12(1): 47.
- Sakkas, H., P. Bozidis, A. Franks and C. Papadopoulou (2018). "Oropouche Fever: A Review." Viruses 10(4).
- Santamaría, E., O. L. Cabrera, Y. Zipa, C. Ferro, M. L. Ahumada and R. H. Pardo (2008). "[Preliminary evaluation of the Culicoides biting nuisance (Diptera: Ceratopogonidae) in the province of Boyacá, Colombia]." Biomedica 28(4): 497-509.
- Santos Pereira, R., J. Facci Colangelo, P. G. Assis Souza, L. G. Ferreira de Carvalho, W. S. da Cruz Nizer and W. G. Lima (2022). "Epidemiological aspects of the Oropouche virus (Orthobunyavirus) in South America: A systematic review." Revista Colombiana de Ciencias Químico-Farmacéuticas 51(1).
- Scachetti, G. C., J. Forato, I. M. Claro, X. Hua, B. B. Salgado, A. Vieira, C. L. Simeoni, A. R. C. Barbosa, I. L. Rosa, G. F. de Souza, L. C. N. Fernandes, A. C. H. de Sena, S. C. Oliveira, C. M. L. Singh, S. T. S. de Lima, R. de Jesus, M. A. Costa, R. B. Kato, J. F. Rocha, L. C. Santos, J. T. Rodrigues, M. P. Cunha, E. C. Sabino, N. R. Faria, S. C. Weaver, C. M. Romano, P. Lalwani, J. L. Proenca-Modena and W. M. de Souza (2025). "Re-emergence of Oropouche virus between 2023 and 2024 in Brazil: an observational epidemiological study." Lancet Infect Dis 25(2): 166-175.
- Sick, F., M. Beer, H. Kampen and K. Wernike (2019). "Culicoides Biting Midges-Underestimated Vectors for Arboviruses of Public Health and Veterinary Importance." Viruses 11(4).
- Unlu, I., A. J. Mackay, A. Roy, M. M. Yates and L. D. Foil (2010). "Evidence of vertical transmission of West Nile virus in field-collected mosquitoes." J Vector Ecol 35(1): 95-99.
- Vázquez, A., J. Sánchez, E. Martínez and A. Alba (2017). "Facilitated invasion of an overseas invader: human mediated settlement and expansion of the giant African snail, Lissachatina fulica, in Cuba." Biological Invasions 19: 1-4.
- Wesselmann, K. M., I. Postigo-Hidalgo, L. Pezzi, E. F. de Oliveira-Filho, C. Fischer, X. de Lamballerie and J. F. Drexler (2024). "Emergence of Oropouche fever in Latin America: a narrative review." Lancet Infect Dis 24(7): e439-e452.
- Yang, C., F. Wang, D. Huang, H. Ma, L. Zhao, G. Zhang, H. Li, Q. Han, D. Bente, F. V. Salazar, Z. Yuan and H. Xia (2022). "Vector competence and immune response of Aedes aegypti for Ebinur Lake virus, a newly classified mosquito-borne orthobunyavirus." PLoS Negl Trop Dis 16(7): e0010642.
- Gaillet M, Pichard C, Restrepo J, Lavergne A, Perez L, Enfissi A, et al. Outbreak of Oropouche Virus in French Guiana. Emerg Infect Dis. 2021;27 10:2711-4. doi:10.3201/eid2710.204760.
Métadonnées additionnelles
| Introduction | |
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| Premiers pas | |
| Objet | |
| Identifiants alternatifs | 70f36828-f03f-486a-bb62-b4be3cb59d06 |
| https://cloud.gbif.org/lac/resource?r=ipk_orov |